Selected Publications

Ishikawa T, Müller M, Klünemann C, Schaub T, Keppler D. 
ATP-dependent primary active transport of cysteinyl leukotrienes across liver canalicular membranes. 
J Biol. Chem. 265: 19279-19286, 1990
Müller M, Ishikawa T, Berger U, Klünemann C, Lucka L , Schreyer A, Kannicht C, Reutter W, Kurz G, Keppler D. 
ATP-dependent transport of taurocholate across the hepatocyte canalicular membrane mediated by a 110-kDa glycoprotein binding ATP and bile salt. 
J Biol. Chem. 266: 18920-18926, 1991
Böhme M, Müller M, Leier I , Jedlitschky G , Keppler D. 
Cholestasis caused by inhibition of the adenosine triphosphate-dependent bile salt transport in rat liver.
Gastroenterology 107: 255-265, 1994
Müller M, Mayer R , Hero U, Keppler D.
ATP-dependent transport of amphiphilic cations across the hepatocyte canalicular membrane mediated by mdr1 p-glycoprotein. 
FEBS. Lett. 343: 168-172, 1994
Müller M, Meijer C, Zaman GJR, Borst P, Scheper R J, Mulder NH, de Vries EGE, Jansen PLM. 
Overexpression of the gene encoding the multidrug resistance-associated protein results in increased ATP-dependent glutathione S-conjugate transport.
Proc. Natl. Acad. Sci. USA. 91: 13033-13037, 1994
de Vries EGE, Müller M, Meijer C, Jansen PLM, Mulder NH. 
Role of the glutathione S-conjugate pump in cisplatin resistance. 
J Nat. Cancer Inst. 87: 537-538, 1995
Dijkstra M, In 't Veld G, Vandenberg GJ, Müller M, Kuipers F, Vonk RJ. 
Adenosine triphosphate-dependent copper transport in isolated rat liver plasma membranes. 
J Clin. Invest. 95: 412-416, 1995. 
Bossuyt X, Müller M, Hagenbuch B, Meier PJ. 
Polyspecific steroid and drug clearance by an organic anion transporter of mammalian liver.
J Pharmacol Exp Ther 276: 891-896, 1996.
Bossuyt X, Müller M, Meier PJ. 
Multispecific amphipathic substrate transport by an organic anion transporter of human liver. 
J Hepatol. 25:733-738, 1996. 
Müller M, de Vries EGE, Jansen PLM. 
Role of the multidrug resistance protein (MRP) in glutathione S-conjugate transport in mammalian cells. 
J Hepatol. 24: 100-108, 1996. 
Müller M, Roelofsen H, Jansen PLM. 
Secretion of organic anions by hepatocytes: Involvement of homologues of the Multidrug Resistance Protein. 
Sem. Liver Dis. 16: 211-220, 1996. 
Roelofsen H, TA Vos, IJ Schippers, F Kuipers, H Koning, H Moshage, PLM Jansen, M Müller. 
Increased levels of the multidrug resistance protein in lateral membranes of proliferating hepatocyte-derived cells. 
Gastroenterology 112:511-521, 1997. 
Asschert J, de Vries E, van der Kolk D, Müller M, Vellenga E. 
The combined effects of IL-3 and PSC 833 on daunorubicin- and mitoxantrone cytotoxicity in two growth factor-dependent leukemic cell lines. 
Leukemia 11:680-686, 1997
Müller M, Jansen PLM
Molecular aspects of hepatobiliary transport. 
Am J Physiol 272:G1285-G1303, 1997
Meijer DKF, Smit JW, Müller M. 
Hepatobiliary elimination of cationic drugs: the role of P-glycoproteins and other ATP-dependent transporters. 
Adv Drug Delivery Rev 25:159-200, 1997
Koopen NR, Wolters H, Müller M, Schippers IJ, Havinga R, Roelofsen H, Vonk R, Stieger B, Meier PJ, Kuipers F: 
Hepatic bile salt flux does not modulate level and activity of the sinusoidal Na+-taurocholate cotransporter (ntcp) in rats.
J Hepatol 1997; 27:699-706
Bakker M, Renes J, Groenhuijzen A, Visser P, Timmer-Bosscha H, Müller M, Groen HJ, Smit EF, de Vries EG. 
Mechanisms for high methoxymorpholino doxorubicin cytotoxicity in doxorubicin-resistant tumor cell lines. 
Int J Cancer 1997;73:362-366 
Schippers IJ, Moshage H, Roelofsen H, Müller M, Heymans HS, Ruiters M, Kuipers F. 
Immortalized human hepatocytes as a tool for the study of hepatocytic (de-)differentiation. 
Cell Biol Toxicol 1997; 13:375-386 
Koopen NR, Wolters H, Havinga R, Vonk RJ, Jansen PLM, Müller M, Kuipers F. 
Impaired activity of the bile canalicular organic anion transporter (mrp2/cmoat) is not the main cause of ethinylestradiol-induced cholestasis in the rat. 
Hepatology 1998; 27: 537-545
Müller M, Jansen PLM. 
The secretory function of the liver: New insights in hepatobiliary transport.
J Hepatol 1998; 28:344-354
Smit JW, Schinkel AH, Müller M, Weert B, Meijer DKF. 
Contribution of the murine mdr1a P-glycoprotein to hepatobiliary and intestinal elimination of cationic drugs as measured in mice with an mdr1a gene disruption. 
Hepatology 1998;27:1056-1063 
van Lyun M, Müller M, Renes J, Meijer C, Scheper RJ, Nienhuis EF, Mulder NH, Jansen PLM, de Vries EGE. 
Transport of glutathione conjugates into secretory vesicles is mediated by the multidrug-resistance protein 1. 
Int J Cancer. 1998; 76: 55-62
Jansen PLM, Müller M. 
Progressive familial intrahepatic cholestasis types 1, 2, and 3. 
Gut 1998; 42: 766-767
van der Kolk DM., de Vries EGE, Koning HJ, van den Berg E, Müller M, Vellenga E. 
Activity and expression of the multidrug resistance proteins MRP1 and MRP2 in acute myleoid leukemia cells, tumor cell lines, and nomal hematopoietic CD34+ peripheral blood cells.
Clin.Canc.Res. 1998; 4:1727-1736
Koopen, NR, Müller M, Vonk, RJ, Zimniak P, Kuipers F. 
Molecular mechanisms of cholestasis: causes and consequences of impaired bile formation.
Biochim. Biophys. Acta. 1998; 1408, 1-17
Vos TA, Hooiveld GJEJ, Koning H, Childs S, Meijer DKF, Moshage H, Jansen PLM, Müller M. 
Up-regulation of the multidrug resistance genes, mrp1 and mdr1b, and down-regulation of the organic anion transporter, mrp2, and the bile salt transporter, spgp, in endotoxemic rat liver. 
Hepatology 1998 Dec;28(6):1637-1644
Jansen PLM, Müller M. 
Early events in sepsis-associated cholestasis. 
Gastroenterology 1999;116:486-488
Renes J, de Vries EGE, Nienhuis, EF, Jansen, PLM, Müller M. 
ATP- and glutathione dependent transport of chemotherapeutic drugs by the multidrug resistance protein MRP1. 
Brit. J. Pharmacol. 1999; 126:681-688
Vellenga E, Tuyt L, Wierenga B-J, Koopmans S, Müller M, Dokter W. 
Interleukin-6 production by activated human monocytic cells is enhanced by the leukotriene D4 receptor antagonist MK-571. 
Brit. J. Pharmacol. 1999; 127:441- 448
Roelofsen H, Hooiveld GJEJ, Koning H, Havinga R, Jansen PLM, Müller M. 
Glutathione S-conjugate transport in hepatocytes entering the cell cycle is preserved by a switch in expression from the apical MRP2 to the basolateral MRP1 transporting protein.
J. Cell Science 1999;112: 1395-1404
Vos TA, Ros J, Havinga R, Moshage H, Kuipers F, Jansen PLM, Müller M. 
Regulation of hepatic transport systems involved in bile secretion during liver regeneration in rats. 
Hepatology 1999;29:1833-1839 
Meerman L, Koopen NR, Bloks V, van Goor H, Havinga R, Wolthers BG, Kramer W, Stengelin S, Müller M, Kuipers F, Jansen PLM. 
Biliary fibrosis associated with altered bile composition in a mouse model of erythropoetic protoporphyria.
Gastroenterology 1999;117:696-705
Hooiveld GJEJ, Vos TA, Scheffer GL, van Goor H, Koning HJ, Bloks V, Loot AE, Meijer DKF, Jansen PLM, Kuipers F, Müller M. 
3-Hydroxy-3-methylglutaryl-coenzyme A reductase inhibitors (statins) induce hepatic expression of the phospholipid translocase mdr2 P-glycoprotein in rats.
Gastroenterology 1999;117:678-687
von Montfoort JE, Hagenbuch B, Fattinger K, Müller M, Groothuis GMM, Meijer DKF, Meier PJ. 
Polyspecific organic anion transporting polypeptides mediate hepatic uptake of amphipathic type II organic cations. 
J Pharmacol Exp Ther 1999; 291:147-152
van der Kolk DM, Vellenga E, Müller M, de Vries EG. 
Multidrug resistance protein MRP1, glutathione, and related enzymes. Their importance in acute myeloid leukemia. 
Adv Exp Med Biol 1999;457:187-98
Meijer DK, Smit JW, Hooiveld GJ, van Montfoort JE, Jansen PL, Müller M. 
The molecular basis for hepatobiliary transport of organic cations and organic anions. 
Pharm Biotechnol 1999;12:89-157
Mills CO, Milkiewicz P, Müller M, Roma MG, Havinga R, Coleman R, Kuipers F, Jansen PLM, Elias E. 
Different pathways of canalicular secretion of sulfated and non-sulfated fluorescent bile acids: a study in isolated hepatocyte couplets. and TR- rats. 
J Hepatol. 1999; 31:678-684
Schaefer M, Roelofsen H, Wolters H, Hofmann WJ, Müller M, Kuipers F, Stremmel W, Vonk RJ. 
Localization of the Wilson's Disease protein in human liver
Gastroenterology 1999 117:1380-1385
Jansen PLM, Strautnieks SS, Jacquemin E, Hadchouel M, Sokal EM, Hooiveld GJEJ, Koning JH, de Jager-Krikken A, Kuipers F, Stellaard F, Bijleveld CMA, Gouw ASH, van Goor H, Thompson RJ, Müller M. 
Hepatocanalicular bile salt export pump deficiency in patients with progressive familial intrahepatic cholestasis. 
Gastroenterology 1999; 117:1370-1379
Jansen PLM, Müller M. 
Genetic cholestasis: Lessons from the molecular physiology of bile formation. 
Can J Gastroenterol 2000; 14(3):233-238
van der Kolk DM, Vellenga E, Van der Veen AY, Noordhoek L, Timmer-Bosscha H, Ossenkoppele GJ, Raymakers RA, Müller M, van den Berg E, de Vries EGE.
Deletion of the multidrug resistance protein MRP1 gene in acute myeloid leukemia: the impact on MRP activity.
Blood 2000; 95 (11): 3514-3519
van Veen HW, Margolles A, Müller M, Higgins CF, Konings WN. 
The homodimeric ATP-binding cassette transporter LmrA mediates multidrug transport by an alternating two-site (two-cylinder engine) mechanism. 
EMBO J. 2000; 19:2503-2514
Kok JW, Veldman RJ, Klappe K, Filipeanu CM, Müller M. 
Differential expression of sphingolipids in MRP1 overexpressing HT29 cells.
Int.J.Cancer. 2000; 87, 172-178
Jansen PLM, Müller M. 
The molecular genetics of familial intrahepatic cholestasis. 
Gut 2000; 47: 1-5
Gupta S, Stravitz RT, Pandak WM, Müller M, Vlahcevic ZR, Hylemon PB. 
Regulation of multidrug resistance 2 P-glycoprotein expression by bile salts in rats and in primary cultures of rat hepatocytes. 
Hepatology 2000; 32:341-347
Renes J, de Vries EGE, Hooiveld GJEJ, Krikken I, Jansen PLM, Müller M. 
The multidrug resistance protein MRP1 protects against the toxicity of the major lipid peroxidation product 4-hydroxynonenal. 
Biochem. J. 2000; 350: 555-561
Müller M. 
The transcriptional control of hepatocanalicular transporter gene expression. 
Sem.Liver Dis. 2000; 20: 323-335
Hooiveld GJEJ, van Montfoort JE, Meijer DKF, Müller M. 
Function and regulation of ATP-binding cassette transport proteins involved in hepatobiliary transport.
Eur.J.Pharm.Sci. 2000; 12:13-30    Erratum
Renes J, de Vries EGE, Jansen PLM, Müller M. 
The (patho)physiological functions of the MRP family. 
Drug Resistance Updates 2000; 3:289-302
Van Den Heuvel MC, Sloof MJH, Visser L, Müller M, De Jong KP, Poppema S, Gouw ASH. 
Expression of anti-OV6 antibody and anti-N-CAM antibody along the biliary line of normal and diseased human livers. 
Hepatology. 2001;33:1387-93
Ros JE, Schuetz JD, Geuken M, Streetz K, Moshage H, Kuipers F, Manns MP, Jansen PLM, Trautwein C, Müller M. 
Induction of Mdr1b Expression by Tumor Necrosis Factor-a in Rat Liver Cells is Independent of p53 but Requires NF-kB Signaling. 
Hepatology. 2001;33:1425-31
van Montfoort JE, Müller M, Groothuis GM, Meijer DK, Koepsell H, Meier PJ. 
Comparison of "Type I" and "Type II" organic cation transport by organic cation transporters (OCTs) and organic anion transporting polypeptides (OATPs). 
J Pharmacol Exp Ther. 2001;298:110-115
van der Kolk DM, de Vries EG, Noordhoek L, van den Berg E, van der Pol MA, Müller M, Vellenga E. 
Activity and expression of the multidrug resistance proteins P-glycoprotein, MRP1, MRP2, MRP3 and MRP5 in de novo and relapsed acute myeloid leukemia. 
Leukemia 2001;15:1544-53
Jansen PLM, Müller M, Sturm E. 
Genes and cholestasis. 
Hepatology. 2001;34:1067-74
Plass JRM, Mol O, Heegsma J, Geuken M, Faber KN, Jansen PLM, Müller M. 
Farnesoid X receptor and bile salts are involved in transcriptional regulation of the gene encoding the human bile salt export pump. 
Hepatology 2002;35:589-96
Van der Kolk DM, Vellenga E, Scheffer GL, Müller M, Bates SE, Scheper RJ, de Vries EGE. 
Expression and activity of breast cancer resistance proetin (BCRP) in de novo and relapsed acute myeloid leukemia. 
Blood. 2002;99:3763-3770
Scheffer GL, Pijnenborg AC, Smit EF, Müller M, Postma DS, Timens W, Van Der Valk P, De Vries EG, Scheper RJ. 
Multidrug resistance related molecules in human and murine lung. 
J Clin Pathol. 2002;55:332-339
Van der Kolk DM, de Vries EGE, Müller M, Vellenga E. 
The role of drug efflux pumps in acute myeloid leukemia. 
Leukemia and Lymphoma 2002; 43:685-701
W. M. van Waarde, H. J. Verkade, H. Wolters, R. Havinga, J. Baller, V. Bloks, M. Müller, P. J. J. Sauer, F. Kuipers. 
Differential effects of streptozotocin-induced diabetes on expression of hepatic ABC-transporters in rats. 
Gastroenterology 2002;122:1842-52
Hooiveld GJEJ, Heegsma J, van Montfoort JE, Jansen PLM, Meijer DKF, Müller M. 
Stereoselective transport of hydrophilic quaternary drugs by human MDR1 and rat Mdr1b P-glycoproteins. 
Brit J Pharmacology 2002;135:1685-1694
Cool RH, Veenstra MK, Van Klompenburg W, Heyne RI, Müller M, De Vries EG, Van Veen HW, Konings WN. 
S-Decyl-glutathione nonspecifically stimulates the ATPase activity of the nucleotide-binding domains of the 
human multidrug resistance-associated protein, MRP1 (ABCC1). 
Eur J Biochem. 2002;269:3470-3478
Faber KN, Müller M, Jansen PLM. 
Drug transport proteins in the liver. 
Adv Drug Deliv Rev 2003;55:107-24
Ros JE, Roskams TAD, Geuken M, Havinga R, Splinter PL, Petersen BE, LaRusso NF, Kuipers F, Faber KN, Müller M, Jansen PLM.
ATP binding cassette transporter gene expression in rat liver progenitor cells.
Gut 2003;52;7:1060-1067
Müller M,  Kersten S.
Nutrigenomics: Goals and Perspectives.
Nature Reviews Genetics 2003;4:315 -322
Plass JR, Mol O, Heegsma J, Geuken M, de Bruin J, Elling G, Müller M, Faber KN, Jansen PL.
A progressive familial intrahepatic cholestasis type 2 mutation causes an unstable, temperature-sensitive bile salt export pump.
J Hepatol. 2004;40:24-30
Mandard S, Müller M, Kersten S.
Peroxisome proliferator-activated receptor a target genes.
CMLS, Cell. Mol. Life Sci. 2004;61:393-416
Stienstra  R, Lichtenauer-Kaligis E, Müller M.
Stress- (and diet-) related regulation of hepatic nuclear receptors and its relevance for ABC-transporter functions
Drug Metabolism Reviews 2004:36:391-406
Patsouris D, Mandard S, Voshol PJ, Escher P, Tan NS, Havekes LM, Koenig W, Marz W, Tafuri S, Wahli W, Müller M, Kersten S.
PPARalpha governs glycerol metabolism
J Clin Invest. 2004 Jul;114(1):94-103
Mandard S, Zandbergen F, Tan NS, Escher P, Patsouris D, Koenig W, Kleemann R, Bakker A, Veenman F, Wahli W, Müller M, Kersten S. 
The direct PPAR target FIAF/PGAR/ANGPTL4 is present in blood plasma as a truncated protein that is increased by fenofibrate treatment.
J Biol Chem. 2004;279(33):34411-20
Patsouris D, Müller M, Kersten S.  Peroxisome proliferator activated receptor ligands for the treatment of insulin resistance. 
Curr Opin Investig Drugs. 2004;5(10):1045-50
Klein C, Wüstefeld T, Assmus U, Roskams T, Rose-John S, Müller M, Manns MP, Ernst E, Trautwein C 
The IL-6-gp130-STAT3 pathway in hepatocytes triggers liver protection in T cell-mediated liver injury.
J. Clin. Invest. 115:860-869 (2005)
Zandbergen F, Mandard S, Escher P, Tan NS, Patsouris D, Jatkoe T, Rojas-Caro S, Madore S, Wahli W, Tafuri S, Müller M, Kersten S. 
The G0/G1 switch gene 2 is a novel PPAR target gene.
Biochem J. 2005;392:313-24.
Corthesy-Theulaz I, den Dunnen JT, Ferre P, Geurts JM, Müller M, van Belzen N, van Ommen B. 
Nutrigenomics: The Impact of Biomics Technology on Nutrition Research.
Ann Nutr Metab. 2005;49:355-365 
Kaput J, Ordovas JM, Ferguson L, van Ommen B, Rodriguez RL, Allen L, Ames BN, Dawson K, German B, Krauss R, 
Malyj W, Archer MC, Barnes S, Bartholomew A, Birk R, van Bladeren P, Bradford KJ, Brown KH, Caetano R, Castle D, 
Chadwick R, Clarke S, Clement K, Cooney CA, Corella D, Manica da Cruz IB, Daniel H, Duster T, E Ebbesson SO, Elliott R, 
Fairweather-Tait S, Felton J, Fenech M, Finley JW, Fogg-Johnson N, Gill-Garrison R, Gibney MJ, Gillies PJ, Gustafsson JA, 
Hartman Iv JL, He L, Hwang JK, Jais JP, Jang Y, Joost H, Junien C, Kanter M, Kibbe WA, Koletzko B, Korf BR, Kornman K, 
Krempin DW, Langin D, Lauren DR, Ho Lee J, Leveille GA, Lin SJ, Mathers J, Mayne M, McNabb W, Milner JA, Morgan P, Müller M, 
Nikolsky Y, van der Ouderaa F, Park T, Pensel N, Perez-Jimenez F, Poutanen K, Roberts M, Saris WH, Schuster G, Shelling AN, 
Simopoulos AP, Southon S, Tai ES, Towne B, Trayhurn P, Uauy R, Visek WJ, Warden C, Weiss R, Wiencke J, Winkler J, 
Wolff GL, Zhao-Wilson X, Zucker JD. 
The case for strategic international alliances to harness nutritional genomics for public and personal healthdagger. 
Br J Nutr. 2005;94:623-632. 
Mandard S, Zandbergen F, van Straten E, Wahli W, Kuipers F, Müller M, Kersten S. 
The fasting-induced adipose factor/angiopoietin-like protein 4 is physically associated with lipoproteins and governs plasma lipid levels and adiposity.
J Biol Chem. 2006 Jan 13;281(2):934-44 
Patsouris D, Reddy JK, Müller M, Kersten S. 
PPAR{alpha} mediates the effects of high fat diet on hepatic gene expression.
Endocrinology. 2006 Mar;147:1508-16
Afman L, Müller M. Nutrigenomics: from molecular nutrition to prevention of disease.
J Am Diet Assoc. 2006;106:569-76
Murphy EF, Jewell C, Hooiveld GJ, Müller M, Cashman KD. 
Conjugated linoleic acid enhances transepithelial calcium transport in human intestinal-like Caco-2 cells: an insight into molecular changes.
Prostaglandins Leukot Essent Fatty Acids. 2006;74:295-301
Krapels IP, Vermeij-Keers C, Müller M, de Klein A, Steegers-Theunissen RP. 
Nutrition and genes in the development of orofacial clefting.
Nutr Rev. 2006;64:280-8
2007
Mandard S, Stienstra R, Escher P, Tan NS, Kim I, Gonzalez FJ, Wahli W, Desvergne B, Müller M, Kersten S
Glycogen synthase 2 is a novel target gene of peroxisome proliferator-activated receptors.
Cell Mol Life Sci. 2007 May;64(9):1145-57
Bunger M, van den Bosch HM, van der Meijde J, Kersten S, Hooiveld GJ, Müller M
Genome-wide analysis of PPAR{alpha} activation in murine small intestine
Physiol Genomics. 2007 Jul 18;30(2):
192-204
Stienstra R, Mandard S, Patsouris D, Maass C, Kersten S, Müller M
PPAR{alpha} protects against obesity-induced hepatic inflammation
Endocrinology. 2007 Jun;148(6):2753-63
Busstra MC, Hartog R, Kersten S, Müller M
Design guidelines for the development of digital nutrigenomics learning material for heterogeneous target groups
Adv Physiol Educ. 2007 Mar;31(1):67-75.
Joost HG, Gibney MJ, Cashman KD, Gorman U, Hesketh JE, Müller M, van Ommen B, Williams CM, Mathers JC
Personalised nutrition: status and perspectives
Br J Nutr. 2007 Jul;98(1):26-31
Stienstra R, Duval C, Müller M, Kersten S
PPARs, Obesity, and Inflammation
PPAR Res. 2006 Nov 23;2007:95974
Stienstra R, Mandard S, Tan NS, Wahli W, Trautwein C, Richardson TA, Lichtenauer-Kaligis E, Kersten S, Müller M
The Interleukin-1 receptor antagonist is a direct target gene of PPARalpha in liver
J Hepatol. 2007 May;46(5):869-77
Ricketts ML, Boekschoten MV, Kreeft AJ, Hooiveld GJ, Moen CJ, Müller M, Frants RR, Kasanmoentalib S, Post SM, Princen HM, Porter JG, Katan MB, Hofker MH, Moore DD
The Cholesterol-Raising Factor from Coffee Beans, Cafestol, as an Agonist Ligand for the Farnesoid and Pregnane X Receptors.

Mol Endocrinol.
2007 Jul;21(7):1603-16.
Duval C, Müller M, Kersten S
PPARalpha and dyslipidemia.
Biochim Biophys Acta. 2007 Aug;1771(8):961-71
Rakhshandehroo M, Sanderson LM, Matilainen M, Stienstra R, Carlberg C, de Groot PJ, Müller M, Kersten S.
Comprehensive analysis of PPARalpha-dependent regulation of hepatic lipid metabolism by expression profiling,
PPAR Research, vol. 2007, Article ID 26839, 13 pages
van den Bosch HM, Bunger M, de Groot PJ, van der Meijde J, Hooiveld GJEJ, Müller M.
Gene expression of transporters and phase I/II metabolic enzymes in murine small intestine during fasting
BMC Genomics 2007, 8:267
Bünger M, Hooiveld GJ, Kersten S, Müller M
Exploration of PPAR functions by microarray technology-A paradigm for nutrigenomics.

Biochim Biophys Acta. 2007 Aug;1771(8):1046-64.
Murphy EF, Hooiveld GJ, Müller M, Calogero RA, Cashman KD
Conjugated linoleic acid alters global gene expression in human intestinal-like Caco-2 cells in an isomer-specific manner.
Bouwens M, Afman LA, Müller M
Fasting induces changes in peripheral blood mononuclear cell gene expression profiles related to increases in fatty acid {beta}-oxidation: functional role of peroxisome proliferator activated receptor {alpha} in human peripheral blood mononuclear cells.
Lichtenstein L, Berbée JF, van Dijk SJ, van Dijk KW, Bensadoun A, Kema IP, Voshol PJ, Müller M, Rensen PC, Kersten S
Angptl4 upregulates cholesterol synthesis in liver via inhibition of LPL- and HL-dependent hepatic cholesterol uptake.
 

2008

1 de Wilde J, Mohren R, van den Berg S, Boekschoten M, Willems-Van Dijk K, De Groot P, Müller M, Mariman EC, Smit E        
Short-term high fat-feeding results in morphological and metabolic adaptations in the skeletal muscle of C57BL/6J mice.
2

Sanderson LM de Groot PJ, Hooiveld GJEJ, Koppen A, Kalkhoven E, Müller M, Kersten S
Effect of Synthetic Dietary Triglycerides: a Novel Research Paradigm for Nutrigenomics
Plos ONE 2008 Feb 27;3(2):e1681.

3 van den Bosch HM, De Wit NJ, Hooiveld GJ, Vermeulen H, van der Veen JN, Houten SM, Kuipers F, Müller M, van der Meer R
A cholesterol free, high-fat diet suppresses gene expression of cholesterol transporters in murine small intestine.
4 de Wit NJ, Bosch-Vermeulen H, de Groot PJ, Hooiveld GJE, Grootte Bromhaar MM, Jansen J, Müller M, van der Meer R
The role of the small intestine in the development of dietary fat-induced obesity and insulin resistance in C57BL/6J mice
BMC Medical Genomics 2008, 1:14
5 de Vogel-van den Bosch HM, Bünger M, de Groot PJ, Bosch-Vermeulen H, Hooiveld GJ, Müller M
PPARalpha-mediated effects of dietary lipids on intestinal barrier gene expression.
BMC Genomics 2008, 9:231
6

Bouwens M, Afman LA, Müller M
Activation of peroxisome proliferator-activated receptor alpha in human peripheral blood mononuclear cells reveals an individual response
BMC Genomics. 2008 Jun 2;9(1):262.

7 Herrema H, Derks TGJ, van Dijk TH, Bloks VW, Gerding A, Havinga R, Tietge UJF, Müller M, Smit PA, Kuipers F, Reijngoud DJ
Disturbed Hepatic Carbohydrate Management During High Metabolic Demand in Medium-Chain Acyl-CoA Dehydrogenase (MCAD)-Deficient Mice
Hepatology 2008 Jun;47(6):1894-904
8

The NuGO proof of principle study package: a collaborative research effort of the European Nutrigenomics Organisation.
Baccini M, Bachmaier EM, Biggeri A, Boekschoten MV, Bouwman FG, Brennan L, Caesar R, Cinti S, Coort SL, Crosley K, Daniel H, Drevon CA, Duthie S, Eijssen L, Elliott RM, van Erk M, Evelo C, Gibney M, Heim C, Horgan GW, Johnson IT, Kelder T, Kleemann R, Kooistra T, van Iersel MP, Mariman EC, Mayer C, McLoughlin G, Müller M, Mulholland F, van Ommen B, Polley AC, Pujos-Guillot E, Rubio-Aliaga I, Roche HM, de Roos B, Sailer M, Tonini G, Williams LM, de Wit N; For the NuGO PPS Team.
Genes Nutr
. 2008 Dec;3(3-4):147-151

9

NuGO contributions to GenePattern.
De Groot PJ, Reiff C, Mayer C, Müller M.
Genes Nutr
. 2008 Dec;3(3-4):143-6

10

The challenges for molecular nutrition research 2: quantification of the nutritional phenotype.
van Ommen B, Keijer J, Kleemann R, Elliott R, Drevon CA, McArdle H, Gibney M, Müller M.
Genes Nutr
. 2008 Jul;3(2):51-9

11
PPARgamma activation promotes infiltration of alternatively activated macrophages into adipose tissue
Stienstra R, Duval C, Keshtkar S, van der Laak J, Kersten S, Müller M.

2009 (Impactfactor > 5 & > 10)

1

Murphy EF, Hooiveld GJ, Müller M, Calogero RA, Cashman KD.
The effect of trans-10, cis-12 conjugated linoleic acid on gene expression profiles related to lipid metabolism in human intestinal-like Caco-2 cells
Genes Nutr. 2009 Mar 13.

2 Giebeler A, Boekschoten MV, Klein C, Borowiak M, Birchmeier C, Gassler N, Wasmuth HE, Müller M, Trautwein C, Streetz KL.
c-Met confers protection against chronic liver tissue damage and fibrosis progression after bile-duct-ligation in mice
Gastroenterology. 2009; 137: 297-308
3 Vaes BL, Lute C, Blom HJ, Bravenboer N, de Vries TJ, Everts V, Dhonukshe-Rutten RA, Müller M, de Groot LC, Steegenga WT.
Vitamin B(12) Deficiency Stimulates Osteoclastogenesis via Increased Homocysteine and Methylmalonic Acid.
Calcif Tissue Int. 2009 Apr 12.
4

Kersten S, Lichtenstein L, Steenbergen E, Mudde K, Hendriks HF, Hesselink MK, Schrauwen P, Müller M.
Caloric Restriction and Exercise Increase Plasma ANGPTL4 Levels in Humans via Elevated Free Fatty Acids.
Arterioscler Thromb Vasc Biol. 2009 Jun; 29:969-74

5 Bouwens M, van de Rest O, Dellschaft N, Bromhaar MG, de Groot LC, Geleijnse JM, Müller M, Afman LA.
Fish-oil supplementation induces antiinflammatory gene expression profiles in human blood mononuclear cells.
Am J Clin Nutr. 2009 Aug; 90:415-24
6 Kersten S, Müller M.
Dropping liver fat droplets.
Hepatology 2009 Aug;50(2):645-7
7 Radonjic M, de Haan JR, van Erk MJ, van Dijk KW, van den Berg SAA, de Groot PJ, Müller M, van Ommen B
Genome-wide mRNA expression analysis of hepatic adaptation to high-fat diets reveals switch from an inflammatory to steatotic transcriptional program.
PLoS One. 2009 Aug 14;4(8):e6646
8 Bioactive compounds: Definition and assessment of activity.
Biesalski HK, Dragsted LO, Elmadfa I, Grossklaus R, Müller M, Schrenk D, Walter P, Weber P
Nutrition. 2009 Aug 18
9 Rakhshandehroo M, Hooiveld G, Müller M, Kersten S.
Comparative analysis of gene regulation by the transcription factor PPARalpha between mouse and human
Plos ONE 2009 Aug 27;4(8):e6796.
10 Vaes BL, Lute C, van der Woning SP, Piek E, Vermeer J, Blom HJ, Mathers JC, Müller M, de Groot LC, Steegenga WT
Inhibition of methylation decreases osteoblast differentiation via a non-dna methylation dependent mechanism.
Bone. 2009 Oct 5.
11 van Dijk SJ, Feskens EFM, Bos MB, Hoelen DWM, Heijligenberg R, Grootte-Bromhaar M, de Vries JHM, Müller M, Afman LA
A saturated fatty acid rich diet induces an ‘obese-linked pro-inflammatory gene expression profile’ in adipose tissue of subjects at risk for metabolic syndrome.
Am J Clin Nutr. 2009 in press
12 Sanderson L, Degenhardt T, Desvergne B, Müller M, Kersten S
PPARβ/δ but not PPARα serves as plasma free fatty acid sensor in liver
Mol. Cell. Biol. 2009 in press
13 Stienstra R, Saudale F, Duval C, Keshtkar S, Groener JEM, van Rooijen N, Staels B, Kersten S, Müller M
Kupffer cells promote hepatic steatosis via IL-1β dependent suppression of PPARalpha activity
Hepatology 2009 in press
14 Bile salt sequestration induces hepatic de novo lipogenesis via FXR and LXR-controlled metbolic pathways in mice
Hepatology 2009 in press
15 The potential influence of genetic variants in genes along bile acid and bile metabolic pathway on blood cholesterol levels in the population
Atherosclerosis 2009 in press

Book chapter
Afman L and Müller M
Transcriptomics applications in human nutrigenomics studies
pp 15-20; In “Design of human nutrigenomics studies” edited by: Siân Astley and Linda Penn 2009, 104 pages
Wageningen Academic Publishers ISBN: 978-90-8686-094-4
 

reprints: michael.muller@wur.nl